New effort engineers smart plants

New effort engineers smart plants

Plant scientists and engineers work together on "smart plants" — computationally engineered plants that could produce better crops or new ways to grow crops.

IOWA State University engineers and plant scientists are joining forces to design better crops that tolerate climate change, produce bigger yields and feed more people.

The collaborative effort to develop computationally engineered plants could have the same kind of impact on agriculture as biomedical engineering has had on medicine, said Daniel Attinger, the leader of the project and an associate professor of mechanical engineering at Iowa State. Plant engineering could produce better crops or new ways to grow crops, just as biomedical engineering has saved lives by developing artificial hearts, robotic surgery and more effective drugs.

"There is so much potential for engineering in living systems," Attinger said. "Engineers and plant biologists can learn a lot from each other."

For example, engineers are fluent in measuring water and nutrient flows, running high-performance computer simulations and visualizing huge amounts of complex data. Additionally, if engineers don't have an instrument to collect or analyze data, they build one.

Plant scientists bring their own tools and techniques to the collaboration. They have a long history of breeding and improving plants, identifying plant traits, understanding genomics and studying soil and environmental impacts on plants.

In the 1970s and '80s, plant scientists took steps toward the primary ambition of the Iowa State collaborators: identifying the necessary traits for ideal crops and then breeding toward that goal.

Such "ideotype breeding" wasn't a great success at the time, said Patrick Schnable, director of Iowa State's Plant Sciences Institute and part of the plant engineering collaboration. Still, Schnable said he sees promise in this new attempt to use the principles of engineering and physics in plant breeding.

He calls the Iowa State effort "a bold experiment at bringing new techniques and approaches to an idea plant scientists have looked at. This new collaboration is developing new science at the interface of plant sciences and engineering."

The effort was launched last summer with a one-year, $100,000 grant from Iowa State's Presidential Initiative for Interdisciplinary Research.

The plant engineering collaboration is already going public with its ideas and findings. The research team sponsored and organized the April 28-29 International Workshop on Engineered Crops, with topics covering genotypes and environmental interactions, plant physiology and nutrient transport, numerical modeling, imaging of plant traits and educational needs.

Plant scientists can utilize engineers by having them assist in identifying the best combinations of genes and traits for better crops.

Baskar Ganapathysubramanian, an assistant professor of mechanical engineering, is working to develop computer models of how the environment affects a plant's nutrient transport, water uptake, photosynthesis and root architecture.

"Instead of going out in the field and doing a lot of experiments that are resource intensive and time intensive, we're coming up with a computational paradigm and throwing that into high-performance computing resources," he said. "This way, you can go through millions and millions of combinations and figure out which ones might work."

Plant scientists and engineers are also working to develop other research techniques. One project, for example, is using engineering tools — including X-ray computed tomography — to study root systems in the soil.

"With these new technologies we're developing, we should be able to look at real root development in the soil over time, and from that, we should be able to model nutrient and water transport in ways that have never been done before," said Larry Halverson, an associate professor of plant pathology and microbiology who studies root biology.

This idea of plant scientists and engineers working together to engineer "smart plants" is all very promising, Halverson said.

"What we intend to do is integrate two disciplines that have really not been integrated very well," he said. "They have different approaches, different philosophies as well as different perspectives on how to answer questions."

Combining the different strengths of both disciplines is the point of this new collaboration, Attinger said.

"The engineers will use quantitative methods to identify the characteristics of ideal crops, and the plant scientists will breed crops having the desired characteristics," he said.

Attinger added that Iowa State, with established research programs in plant sciences and engineering, is a good fit for an effort to develop engineered plants.

"This can be a game-changer for Iowa," Attinger said. "We have high-tech agriculture industries and extremely good soil and farms for large-scale testing. There might be no place better than Iowa's Cultivation Corridor to engineer plants."

Volume:86 Issue:19

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